readfcs.view

readfcs.view(filepath, data_set=0, ignore_offset_error=False, ignore_offset_discrepancy=False, use_header_offsets=False, only_text=False)

Read in file content without preprocessing for debugging.

Parameters:
  • filepath (str | Path) – Location of fcs file to parse

  • data_set (int, default: 0) – Index of retrieved data set in the fcs file.

  • ignore_offset_error (bool, default: False) – Ignore data offset error.

  • ignore_offset_discrepancy (bool, default: False) – Ignore discrepancy between the HEADER and TEXT values for the DATA byte offset location.

  • use_header_offsets (bool, default: False) – Use the HEADER section for the data offset locations. Setting this option to True also suppresses an error in cases of an offset discrepancy.

  • only_text (bool, default: False) – Only read the “text” segment of the FCS file without loading event data.

Return type:

tuple

Returns:

a tuple of (data, metadata) - data is a DataFrame - metadata is a dictionary

See flowio.FlowData:

https://flowio.readthedocs.io/en/latest/api.html#flowio.FlowData